docstrings, changes to equivalence.ipynb

docs/guide/equivalence.ipynb

@@ -2165,15 +2165,17 @@
     "The weights dictionary should contain both the weight and the comparison function for each property. You may use the default weights and functions, or provide your own.\n",
     "\n",
     "##### Existing comparison functions\n",
-    "For reference, here is a list of the comparison functions already built in the codebase (found in [stix2/environment.py](../api/stix2.environment.rst#stix2.environment.Environment)):\n",
+    "For reference, here is a list of the comparison functions already built in the codebase (found in [stix2/equivalence/object](../api/equivalence/stix2.equivalence.object.rst#module-stix2.equivalence.object)):\n",
     "\n",
-    " - [custom_pattern_based](../api/stix2.environment.rst#stix2.environment.custom_pattern_based)\n",
+    " - [custom_pattern_based](../api/equivalence/stix2.equivalence.object.rst#stix2.equivalence.object.custom_pattern_based)\n",
-    " - [exact_match](../api/stix2.environment.rst#stix2.environment.exact_match)\n",
+    " - [exact_match](../api/equivalence/stix2.equivalence.object.rst#stix2.equivalence.object.exact_match)\n",
-    " - [partial_external_reference_based](../api/stix2.environment.rst#stix2.environment.partial_external_reference_based)\n",
+    " - [list_reference_check](../api/equivalence/stix2.equivalence.object.rst#stix2.equivalence.object.list_reference_check)\n",
-    " - [partial_list_based](../api/stix2.environment.rst#stix2.environment.partial_list_based)\n",
+    " - [partial_external_reference_based](../api/equivalence/stix2.equivalence.object.rst#stix2.equivalence.object.partial_external_reference_based)\n",
-    " - [partial_location_distance](../api/stix2.environment.rst#stix2.environment.partial_location_distance)\n",
+    " - [partial_list_based](../api/equivalence/stix2.equivalence.object.rst#stix2.equivalence.object.partial_list_based)\n",
-    " - [partial_string_based](../api/stix2.environment.rst#stix2.environment.partial_string_based)\n",
+    " - [partial_location_distance](../api/equivalence/stix2.equivalence.object.rst#stix2.equivalence.object.partial_location_distance)\n",
-    " - [partial_timestamp_based](../api/stix2.environment.rst#stix2.environment.partial_timestamp_based)\n",
+    " - [partial_string_based](../api/equivalence/stix2.equivalence.object.rst#stix2.equivalence.object.partial_string_based)\n",
+    " - [partial_timestamp_based](../api/equivalence/stix2.equivalence.object.rst#stix2.equivalence.object.partial_timestamp_based)\n",
+    " - [reference_check](../api/equivalence/stix2.equivalence.object.rst#stix2.equivalence.object.reference_check)\n",
     "\n",
     "For instance, if we wanted to compare two of the `ThreatActor`s from before, but use our own weights, then we could do the following:"
    ]

stix2/environment.py

@@ -4,7 +4,7 @@ import copy
 from .datastore import CompositeDataSource, DataStoreMixin
 from .equivalence.graph import graphically_equivalent
 from .equivalence.object import (  # noqa: F401
-    check_property_present, custom_pattern_based, exact_match,
+    WEIGHTS, check_property_present, custom_pattern_based, exact_match,
     list_reference_check, partial_external_reference_based, partial_list_based,
     partial_location_distance, partial_string_based, partial_timestamp_based,
     reference_check, semantically_equivalent,
@@ -222,7 +222,7 @@ class Environment(DataStoreMixin):
         Note:
             Default weights_dict:
 
-            .. include:: ../default_sem_eq_weights.rst
+            .. include:: ../object_default_sem_eq_weights.rst
 
         Note:
             This implementation follows the Semantic Equivalence Committee Note.
@@ -260,7 +260,7 @@ class Environment(DataStoreMixin):
         Note:
             Default weights_dict:
 
-            .. include:: ../default_sem_eq_weights.rst
+            .. include:: ../graph_default_sem_eq_weights.rst
 
         Note:
             This implementation follows the Semantic Equivalence Committee Note.

stix2/equivalence/graph/__init__.py

@@ -1,3 +1,4 @@
+"""Python APIs for STIX 2 Graph-based Semantic Equivalence."""
 import logging
 
 from ..object import (
@@ -36,7 +37,7 @@ def graphically_equivalent(ds1, ds2, prop_scores={}, **weight_dict):
     Note:
         Default weights_dict:
 
-        .. include:: ../default_sem_eq_weights.rst
+        .. include:: ../../graph_default_sem_eq_weights.rst
 
     Note:
         This implementation follows the Semantic Equivalence Committee Note.
@@ -133,4 +134,4 @@ GRAPH_WEIGHTS.update({
         "ds2": None,
         "max_depth": 1,
     },
-})  #: :autodoc-skip:
+})  # :autodoc-skip:

stix2/equivalence/object/__init__.py

@@ -1,3 +1,4 @@
+"""Python APIs for STIX 2 Object-based Semantic Equivalence."""
 import logging
 import time
 
@@ -32,7 +33,7 @@ def semantically_equivalent(obj1, obj2, prop_scores={}, **weight_dict):
     Note:
         Default weights_dict:
 
-        .. include:: ../default_sem_eq_weights.rst
+        .. include:: ../../object_default_sem_eq_weights.rst
 
     Note:
         This implementation follows the Semantic Equivalence Committee Note.
@@ -448,4 +449,4 @@ WEIGHTS = {
     "_internal": {
         "ignore_spec_version": False,
     },
-}  #: :autodoc-skip:
+}  # :autodoc-skip:

stix2/equivalence/pattern/__init__.py

@@ -1,7 +1,7 @@
 """Python APIs for STIX 2 Pattern Semantic Equivalence.
 
 .. autosummary::
-   :toctree: patterns
+   :toctree: pattern
 
    compare
    transform